SysMO SEEK People

Charlotte Cook

Disciplines: Modeller, Bioinformatician

Roles: Not specified

Expertise: Next generation sequence analysis and simulation modelling

Projects: SHIPREC

Institutions: Animal Health and Veterinary Laboratories Agency (Defra)

Tools: SAS, a little scala and openCL, Perl, Python, R

No description specified

Alex Gammerman

Disciplines: Modeller, Bioinformatician

Roles: Member

Expertise: data analysis, machine learning

Projects: SHIPREC

Institutions: Royal Holloway University of London

Tools: Conformal Predictors; RHUL SVM

I am Professor of Computer Science and co-Director of Computer Learning Research Centre.
My research interest lies in machine learning and data analysis. For details, see my website:
http://clrc.rhul.ac.uk/people/alex/CV.pdf

Meghana Kshirsagar

Disciplines: Modeller

Roles: Not specified

Expertise: machine learning

Projects: SHIPREC

Institutions: Carnegie Mellon University

Tools: Not specified

PhD student at CMU

Daniel Poglayen

Disciplines: Modeller, Bioinformatician

Roles: PhD Student

Expertise: Not specified

Projects: SHIPREC

Institutions: Universitat Pompeu Fabra

Tools: Not specified

No description specified

Ian Simpson

Disciplines: Modeller, Experimentalist, Bioinformatician

Roles: Not specified

Expertise: Not specified

Projects: SynProt

Institutions: University of Edinburgh

Tools: Not specified

No description specified

Edwin Van Leeuwen

Disciplines: Modeller

Roles: Postdoc

Expertise: mapk-cascade, protein dynamics, protein protein interactions, Mathematical modelling

Projects: SHIPREC

Institutions: Royal Holloway University of London

Tools: MCMC approaches, Agent-based modelling, Algebraic equations, ODE, SBML, Computational and theoretical biology

I am a postdoc at Royal Holloway, University of London, working on developing new methods to analyse and compare time resolved
phosphorylation data, which will allow us to better understand the complex protein signalling networks that govern host invasion by Salmonella. When comparing different models of interaction it is often unnecessary to know the exact values of parameters of the models. Instead it is possible to integrate over the whole range of possible parameter values.

Previously I was
...

Michael Walker

Disciplines: Modeller

Roles: Member, Postdoc

Expertise: physics, Software Engineering, Mathematical modelling

Projects: iSAM

Institutions: INRIA

Tools: Partial differential equations, Algebraic equations, Computational and theoretical biology

I am an Australian postdoc working with the Virtual Plants team under Christophe Godin. My work is primarily modelling and theoretical understanding of auxin transport models and their interactions with other systems within the SAM. I also contribute to other tools within the openalea framework.